SNP Profiles of APA 4 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
1._RUQ_843	_	_	CC	_	_	_	_	_	AA	_	GG	_	_	_
2._APA4	_	_	CC	_	CC	GG	AA	GG	AA	_	_	GG	AA	CC
3._RUQ_843	AA	CC	CC	AA	GG	GG	AA	GG	AA	GG	GG	GG	AA	GG
4._APA_4_Fld#_26_Plt#_1	AA	CC	CC	AA	GG	GG	AA	GG	AA	GG	GG	GG	AA	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	TT	CC	AA	CC	CC	TT	GG	GG	TT	AA	GG	CC
1._RUQ_843	_	AC	_	CC	AA	CC	_	TT	GG	GG	_	AA	GG	_
2._APA4	_	_	_	CC	AA	CC	_	_	_	_	_	_	CC	GG
3._RUQ_843	_	CC	AA	CC	AA	GG	GG	_	CC	GG	AA	AA	CC	_
4._APA_4_Fld#_26_Plt#_1	_	CC	AA	CC	AA	GG	GG	_	CC	GG	AA	AA	CC	_

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	CC	GG	TT	CC	GG	AA	TT	TT	CC	TT	CC	GG	AA	X_X
1._RUQ_843	_	GG	TT	_	_	_	_	TT	_	_	_	GG	_	X_X
2._APA4	CC	_	_	CC	_	AA	TT	_	_	TT	_	CC	_	X_X
3._RUQ_843	GG	GG	_	GG	CC	AA	_	AA	GG	AA	GG	CC	AA	X_X
4._APA_4_Fld#_26_Plt#_1	GG	GG	_	GG	CC	AA	_	AA	GG	AA	GG	CC	AA	X_X

Input profile: APA_4 RUQ_843

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._APA_4 RUQ_843

96.9 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

2._APA_4 APA4

80 %
20 shared markers

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Center for Forestry Research and Technology Transfer, Vietnam

Location: CEFORTT

Jocelyn De Wever et al., 2019

3._APA_4 RUQ_843

44.4 %
36 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

4._APA_4 APA_4_Fld#_26_Plt#_1

44.4 %
36 shared markers

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USDA-TARS, United States of America

Location: Field: 26, Tree: 1

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP560	18	TcSNP577	19	TcSNP591	20	TcSNP602
21	TcSNP619	22	TcSNP702	23	TcSNP723	24	TcSNP731	25	TcSNP799
26	TcSNP823	27	TcSNP872	28	TcSNP878	29	TcSNP891	30	TcSNP998
31	TcSNP999	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484